BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB005A02SP1|AL425307
(734 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1724 1409 0.0
>3x_Contig1724
Length = 20938
Score = 1409 bits (700), Expect = 0.0
Identities = 717/734 (97%)
Strand = Plus / Minus
Query: 1 tttattttctaamagttttgaagctaaatctgtatcgttgaactgcaacaataacgaaac 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16412 tttattttctaaaagttttgaagctaaatctgtatcgttgaactgcaacaataacgaaac 16353
Query: 61 taaagtgaaagcmgatattaagttgaactgttcatcagaaaaasatttattcaaagtatg 120
|||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 16352 taaagtgaaagcagatattaagttgaactgttcatcagaaaaagatttattcaaagtatg 16293
Query: 121 tycgtacaattggtttaamacgtcccttgcacctctctttgaaagcmattcgactagctg 180
| |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||
Sbjct: 16292 ttcgtacaattggtttaaaacgtcccttgcacctctctttgaaagcaattcgactagctg 16233
Query: 181 ttcattatatggctctaaagtcaatagttgagagaatagattgacaacacatttgttaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16232 ttcattatatggctctaaagtcaatagttgagagaatagattgacaacacatttgttaac 16173
Query: 241 atccaggttgttcgaagtttctaamatgtgtaatagagaagtcaaggcagtgtccaatgg 300
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 16172 atccaggttgttcgaagtttctaaaatgtgtaatagagaagtcaaggcagtgtccaatgg 16113
Query: 301 taagtctagtttctgatttttcaacaatctactttctagactcttagtcgtttcgccatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16112 taagtctagtttctgatttttcaacaatctactttctagactcttagtcgtttcgccatc 16053
Query: 361 aaacttactaatctcagacgagcgcaccaacgcatcccatcctattgttcttgagttcaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16052 aaacttactaatctcagacgagcgcaccaacgcatcccatcctattgttcttgagttcaa 15993
Query: 421 agcatgacgaatccgttggaaatgagtactatccagtagtatatgcytaamttggctgtt 480
|||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 15992 agcatgacgaatccgttggaaatgagtactatccagtagtatatgcttaaattggctgtt 15933
Query: 481 catcccggagtgctgacacaaactggatacaatcaacaatcagtactgctaattttttcg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15932 catcccggagtgctgacacaaactggatacaatcaacaatcagtactgctaattttttcg 15873
Query: 541 ttggacaacgaatgcttgaccaataattagagcaagtgggccgctagctgaattcttttg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15872 ttggacaacgaatgcttgaccaataattagagcaagtgggccgctagctgaattcttttg 15813
Query: 601 tagcagggctcaccttttaammmtgtgtmtmmttttatttgaaagatmgtttatattaaa 660
|||||||||||||||||||| ||||| | ||||||||||||||| ||||||||||||
Sbjct: 15812 tagcagggctcaccttttaaccctgtgtctccttttatttgaaagatcgtttatattaaa 15753
Query: 661 tttcgaaagtcttcataatttcaagcactgggtatmaaagtgcgggtaatatttgatgtc 720
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 15752 tttcgaaagtcttcataatttcaagcactgggtatcaaagtgcgggtaatatttgatgtc 15693
Query: 721 tcaccatctgaaaa 734
||||||||||||||
Sbjct: 15692 tcaccatctgaaaa 15679
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.32
Gapped
Lambda K H
1.40 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4539
Number of Sequences: 1807
Number of extensions: 4539
Number of successful extensions: 81
Number of sequences better than 1.0e-20: 1
length of query: 734
length of database: 10,358,551
effective HSP length: 16
effective length of query: 718
effective length of database: 10,329,639
effective search space: 7416680802
effective search space used: 7416680802
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.6 bits)
S2: 50 (101.1 bits)